Oligo Entry

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Sequence (5' → 3')

5' mods

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Mod Code	Mod Name	Category
/52AmPr/	5' 2-Aminopurine	Spacers
/52MOErA/	5' 2-MethoxyEthoxy A	Modified Bases
/52MOErG/	5' 2-MethoxyEthoxy G	Modified Bases
/52MOErC/	5' 2-MethoxyEthoxy MeC	Modified Bases
/52MOErT/	5' 2-MethoxyEthoxy T	Modified Bases
/5AmdA/	5' 2, 6-Diaminopurine	Modified Bases
/52FA/	5' 2'-Fluoro A	Modified Bases
/52FC/	5' 2'-Fluoro C	Modified Bases
/52FG/	5' 2'-Fluoro G	Modified Bases
/52FU/	5' 2'-Fluoro U	Modified Bases
/55Br-dU/	5' 5-Bromo dU	Modified Bases
/55HydMe-dC/	5' 5-Hydroxymethyl dC	Modified Bases
/5Me-dC/	5' 5-Methyl dC	Modified Bases
/55NitInd/	5' 5-Nitroindole	Modified Bases
/55OctdU/	5' 5-Octadiynyl dU	Attachment Chemistry / Linkers
/55-TAMK/	5' 5-TAMRA (Azide)	Fluorophores
/56-FAM/	5' 6-FAM	Fluorophores
/56-FAMK/	5' 6-FAM (Azide)	Fluorophores
/56-FAMN/	5' 6-FAM (NHS Ester)	Fluorophores
/5Acryd/	5' Acrydite™	Attachment Chemistry / Linkers
/5rApp/	5' Adenylation	Attachment Chemistry / Linkers
/5Alex405N/	5' Alexa Fluor® 405 (NHS Ester)	Fluorophores
/5Alex488N/	5' Alexa Fluor® 488 (NHS Ester)	Fluorophores
/5Alex532N/	5' Alexa Fluor® 532 (NHS Ester)	Fluorophores
/5Alex546N/	5' Alexa Fluor® 546 (NHS Ester)	Fluorophores
/5Alex594N/	5' Alexa Fluor® 594 (NHS Ester)	Fluorophores
/5Alex647N/	5' Alexa Fluor® 647 (NHS Ester)	Fluorophores
/5Alex660N/	5' Alexa Fluor® 660 (NHS Ester)	Fluorophores
/5Alex750N/	5' Alexa Fluor® 750 (NHS Ester)	Fluorophores
/5AmMC12/	5' Amino Modifier C12	Attachment Chemistry / Linkers
/5AmMC6/	5' Amino Modifier C6	Attachment Chemistry / Linkers
/5AmMC6T/	5' Amino Modifier C6 dT	Attachment Chemistry / Linkers
/5ATTO425N/	5' ATTO™ 425 (NHS Ester)	Fluorophores
/5ATTO488N/	5' ATTO™ 488 (NHS Ester)	Fluorophores
/5ATTO532N/	5' ATTO™ 532 (NHS Ester)	Fluorophores
/5ATTO550N/	5' ATTO™ 550 (NHS Ester)	Fluorophores
/5ATTO565N/	5' ATTO™ 565 (NHS Ester)	Fluorophores
/5ATTO590N/	5' ATTO™ 590 (NHS Ester)	Fluorophores
/5ATTO633N/	5' ATTO™ 633 (NHS Ester)	Fluorophores
/5ATTO647NN/	5' ATTO™ 647N (NHS Ester)	Fluorophores
/5ATTO700N/	5' ATTO™ 700 (NHS Ester)	Fluorophores
/5RHO101N/	5' ATTO™ Rho101 (NHS Ester)	Fluorophores
/5AzideN/	5' Azide (NHS Ester)	Attachment Chemistry / Linkers
/5Biosg/	5' Biotin	Attachment Chemistry / Linkers
/5BioK/	5' Biotin (Azide)	Attachment Chemistry / Linkers
/5BiodT/	5' Biotin dT	Attachment Chemistry / Linkers
/5BiotinTEG/	5' Biotin-TEG	Attachment Chemistry / Linkers
/5BHQ_1/	5' Black Hole Quencher® 1	Dark Quenchers
/5BHQ_2/	5' Black Hole Quencher® 2	Dark Quenchers
/5SpC3/	5' C3 Spacer	Spacers
/5Chol-TEG/	5' Cholesterol-TEG	Attachment Chemistry / Linkers
/5Cy3/	5' Cy®3	Fluorophores
/5Cy5/	5' Cy®5	Fluorophores
/5Cy55/	5' Cy®5.5	Fluorophores
/5DBCON/	5' DBCO (NHS-Ester)	Attachment Chemistry / Linkers
/5DBCOTEG/	5' DBCO-TEG	Attachment Chemistry / Linkers
/5deoxyI/	5' deoxyInosine	Modified Bases
/5deoxyU/	5' deoxyUridine	Modified Bases
/5deSBioTEG/	5' Desthiobiotin-TEG	Attachment Chemistry / Linkers
/5DigN/	5' Digoxigenin (NHS Ester)	Attachment Chemistry / Linkers
/5DTPA/	5' Dithiol	Attachment Chemistry / Linkers
/5dSp/	5' dSpacer	Spacers
/52-Bio/	5' Dual Biotin	Attachment Chemistry / Linkers
/5Dy750N/	5' Dy 750 (NHS Ester)	Fluorophores
/5FluorT/	5' Fluorescein dT	Fluorophores
/5HEX/	5' HEX	Fluorophores
/5Hexynyl/	5' Hexynyl	Attachment Chemistry / Linkers
/5ILink12/	5' I-Linker 1.2	Attachment Chemistry / Linkers
/5InvddT/	5' Inverted Dideoxy-T	Modified Bases
/5IABkFQ/	5' Iowa Black™ FQ	Iowa Black&reg Dark Quenchers
/5IAbRQ/	5' Iowa Black™ RQ	Iowa Black&reg Dark Quenchers
/5IRD700/	5' IRDye® 700	Fluorophores
/5IRD800/	5' IRDye® 800	Fluorophores
/5IRD800CWN/	5' IRDye® 800CW (NHS Ester)	Fluorophores
/5Me-isodC/	5' isodC	Modified Bases
/5isodG/	5' isodG	Modified Bases
/56-JOEN/	5' JOE™ (NHS Ester)	Fluorophores
/5LtC640N/	5' LightCycler® 640 (NHS Ester)	Fluorophores
/5MAXN/	5' MAX™ (NHS Ester)	Fluorophores
/5PCBio/	5' PC Biotin	Attachment Chemistry / Linkers
/5SpPC/	5' PC Spacer	Spacers
/5Phos/	5' Phosphorylation	Phosphorylation
/5RhoG-XN/	5' Rhodamine Green™ -X (NHS Ester)	Fluorophores
/5RhoR-XN/	5' RhodamineRed™-X (NHS Ester)	Fluorophores
/56-ROXN/	5' ROX (NHS Ester)	Fluorophores
/5Sp18/	5' Spacer 18	Spacers
/5Sp9/	5' Spacer 9	Spacers
/5SUN/	5' SUN™	Fluorophores
/5Super-dG/	5' Super G®	Modified Bases
/5Super-dT/	5' Super T®	Modified Bases
/56-TAMN/	5' TAMRA (NHS Ester)	Fluorophores
/5TET/	5' TET	Fluorophores
/5TEX615/	5' TEX 615™	Fluorophores
/5TexRd-XN/	5' Texas Red®-X (NHS Ester)	Fluorophores
/5ThioMC6-D/	5' Thiol Modifier C6 S-S	Attachment Chemistry / Linkers
/5TYE563/	5' TYE™ 563	Fluorophores
/5TYE665/	5' TYE™ 665	Fluorophores
/5TYE705/	5' TYE™ 705	Fluorophores
/5UniAmM/	5' Uni-Link™ Amino Modifier	Attachment Chemistry / Linkers
/5YakYel/	5' Yakima Yellow®	Fluorophores

Internal mods

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Mod Code	Mod Name	Category
/i2AmPr/	Int 2-Aminopurine	Spacers
/i2MOErA/	Int 2-MethoxyEthoxy A	Modified Bases
/i2MOErG/	Int 2-MethoxyEthoxy G	Modified Bases
/i2MOErC/	Int 2-MethoxyEthoxy MeC	Modified Bases
/i2MOErT/	Int 2-MethoxyEthoxy T	Modified Bases
/i6diPr/	Int 2, 6-Diaminopurine	Modified Bases
/i2FA/	Int 2'-Fluoro A	Modified Bases
/i2FC/	Int 2'-Fluoro C	Modified Bases
/i2FG/	Int 2'-Fluoro G	Modified Bases
/i2FU/	Int 2'-Fluoro U	Modified Bases
/i5Br-dU/	Int 5-Bromo dU	Modified Bases
/i5HydMe-dC/	Int 5-Hydroxymethyl dC	Modified Bases
/iMe-dC/	Int 5-Methyl dC	Modified Bases
/i5NitInd/	Int 5-Nitroindole	Modified Bases
/i5OctdU/	Int 5-Octadiynyl dU	Attachment Chemistry / Linkers
/i5-TAMK/	Int 5-TAMRA (Azide)	Fluorophores
/i6-FAMK/	Int 6-FAM (Azide)	Fluorophores
/i8oxodG/	Int 8-oxo dG	Modified Bases
/iAmMC6T/	Int Amino Modifier C6 dT	Attachment Chemistry / Linkers
/iAzideN/	Int Azide (NHS Ester)	Attachment Chemistry / Linkers
/iBiodUK/	Int Biotin (Azide)	Attachment Chemistry / Linkers
/iBiodT/	Int Biotin dT	Attachment Chemistry / Linkers
/iBHQ-1/	Int Black Hole Quencher® 1	Dark Quenchers
/iBHQ-1dT/	Int Black Hole Quencher® 1 dT	Dark Quenchers
/iBHQ-2/	Int Black Hole Quencher® 2	Dark Quenchers
/iBHQ-2dT/	Int Black Hole Quencher® 2 dT	Dark Quenchers
/iSpC3/	Int C3 Spacer	Spacers
/iCy3/	Int Cy®3	Fluorophores
/iCy5/	Int Cy®5	Fluorophores
/ideoxyI/	Int deoxyInosine	Modified Bases
/ideoxyU/	Int deoxyUridine	Modified Bases
/ideSBioTEG/	Int Desthiobiotin-TEG	Attachment Chemistry / Linkers
/iDTPA/	Int Dithiol	Attachment Chemistry / Linkers
/idSp/	Int dSpacer	Spacers
/iFluorT/	Int Fluorescein dT	Fluorophores
/iMe-isodC/	Int isodC	Modified Bases
/iisodG/	Int isodG	Modified Bases
/iN6Me-dA/	Int N6-Methyl deoxyAdenosine	Modified Bases
/iN6Me-rA/	Int N6-Methyl rA	Modified Bases
/iSpPC/	Int PC Spacer	Spacers
/iRiboI/	Int Ribo I	Modified Bases
/iSp18/	Int Spacer 18	Spacers
/iSp9/	Int Spacer 9	Spacers
/iSuper-dG/	Int Super G®	Modified Bases
/iSuper-dT/	Int Super T®	Modified Bases
/i6-TAMN/	Int TAMRA (NHS Ester)	Fluorophores
/iThioMC6-D/	Int Thiol Modifier C6 S-S (Disulfide)	Attachment Chemistry / Linkers
/iUniAmM/	Int Uni-Link™ Amino Modifier	Attachment Chemistry / Linkers

3' mods

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Mod Code	Mod Name	Category
/32AmPu/	3' 2-Aminopurine	Spacers
/32MOErA/	3' 2-MethoxyEthoxy A	Modified Bases
/32MOErG/	3' 2-MethoxyEthoxy G	Modified Bases
/32MOErC/	3' 2-MethoxyEthoxy MeC	Modified Bases
/32MOErT/	3' 2-MethoxyEthoxy T	Modified Bases
/3AmdA/	3' 2, 6-Diaminopurine	Modified Bases
/32FA/	3' 2'-Fluoro A	Modified Bases
/32FC/	3' 2'-Fluoro C	Modified Bases
/32FG/	3' 2'-Fluoro G	Modified Bases
/32FU/	3' 2'-Fluoro U	Modified Bases
/35HydMe-dC/	3' 5-Hydroxymethyl dC	Modified Bases
/3Me-dC/	3' 5-Me dC	Modified Bases
/35NitInd/	3' 5-Nitroindole	Modified Bases
/35OctdU/	3' 5-Octadiynyl dU	Attachment Chemistry / Linkers
/36-FAM/	3' 6-FAM	Fluorophores
/3FAM_N/	3' 6-FAM (NHS Ester)	Fluorophores
/3AlexF488N/	3' Alexa Fluor® 488 (NHS Ester) (v3)	Fluorophores
/3AlexF532N/	3' Alexa Fluor® 532 (NHS Ester) (v3)	Fluorophores
/3AlexF546N/	3' Alexa Fluor® 546 (NHS Ester) (v3)	Fluorophores
/3AlexF594N/	3' Alexa Fluor® 594 (NHS Ester) (v3)	Fluorophores
/3AlexF647N/	3' Alexa Fluor® 647 (NHS Ester) (v3)	Fluorophores
/3AlexF660N/	3' Alexa Fluor® 660 (NHS Ester) (v3)	Fluorophores
/3AlexF750N/	3' Alexa Fluor® 750 (NHS Ester) (v3)	Fluorophores
/3AmMO/	3' Amino Modifier	Attachment Chemistry / Linkers
/3AmMC6T/	3' Amino Modifier C6 dT	Attachment Chemistry / Linkers
/3ATTO488N/	3' ATTO™ 488 (NHS Ester)	Fluorophores
/3ATTO532N/	3' ATTO™ 532 (NHS Ester)	Fluorophores
/3ATTO550N/	3' ATTO™ 550 (NHS Ester)	Fluorophores
/3ATTO565N/	3' ATTO™ 565 (NHS Ester)	Fluorophores
/3ATTO590N/	3' ATTO™ 590 (NHS Ester)	Fluorophores
/3ATTO633N/	3' ATTO™ 633 (NHS Ester)	Fluorophores
/3ATTO647NN/	3' ATTO™ 647N (NHS Ester)	Fluorophores
/3RHO101N/	3' ATTO™ Rho101 (NHS Ester)	Fluorophores
/3AzideN/	3' Azide (NHS Ester)	Attachment Chemistry / Linkers
/3Bio/	3' Biotin	Attachment Chemistry / Linkers
/3BiodT/	3' Biotin dT	Attachment Chemistry / Linkers
/3BioTEG/	3' Biotin-TEG	Attachment Chemistry / Linkers
/3BHQ_1/	3' Black Hole Quencher® 1	Dark Quenchers
/3BHQ_2/	3' Black Hole Quencher® 2	Dark Quenchers
/3BHQ-3/	3' Black Hole Quencher® 3	Dark Quenchers
/3SpC3/	3' C3 Spacer	Spacers
/3CholTEG/	3' Cholesterol-TEG	Attachment Chemistry / Linkers
/3Cy3Sp/	3' Cy®3-Sp	Fluorophores
/3Cy5Sp/	3' Cy®5-Sp	Fluorophores
/3Cy55Sp/	3' Cy®5.5-Sp	Fluorophores
/3Dab/	3' Dabcyl	Dark Quenchers
/3DBCON/	3' DBCO (NHS-Ester)	Attachment Chemistry / Linkers
/3deoxyI/	3' deoxyInosine	Modified Bases
/3deoxyU/	3' deoxyUridine	Modified Bases
/3deSBioTEG/	3' Desthiobiotin-TEG	Attachment Chemistry / Linkers
/3ddC/	3' Dideoxy-C	Modified Bases
/3Dig_N/	3' Digoxigenin (NHS Ester)	Attachment Chemistry / Linkers
/3DTPA/	3' Dithiol	Attachment Chemistry / Linkers
/3dSp/	3' dSpacer	Spacers
/3FluorT/	3' Fluorescein dT	Fluorophores
/3InvdT/	3' Inverted dT	Modified Bases
/3IABkFQ/	3' Iowa Black™ FQ	Iowa Black&reg Dark Quenchers
/3IAbRQSp/	3' Iowa Black™ RQ-Sp	Iowa Black&reg Dark Quenchers
/3Joe_N/	3' JOE™ (NHS Ester)	Fluorophores
/3LtCy640N/	3' LightCycler® 640 (NHS Ester) (v3)	Fluorophores
/3MAX_N/	3' MAX™ (NHS Ester)	Fluorophores
/3Phos/	3' Phosphorylation	Phosphorylation
/3Puro/	3' Puromycin	Modified Bases
/3RhodGn-XN/	3' Rhodamine Green™-X (NHS Ester) (v3)	Fluorophores
/3RhodRd-XN/	3' Rhodamine Red™-X (NHS Ester) (v3)	Fluorophores
/3Sp18/	3' Spacer 18	Spacers
/3Sp9/	3' Spacer 9	Spacers
/3Super-dG/	3' Super G®	Modified Bases
/3Super-dT/	3' Super T®	Modified Bases
/36-TAMTSp/	3' TAMRA (NHS Ester)-Sp	Fluorophores
/36-TAMSp/	3' TAMRA-Sp	Fluorophores
/3TEX615/	3' TEX 615™	Fluorophores
/3TxRed-XN/	3' Texas Red®-X (NHS Ester) (v3)	Fluorophores
/3ThioMC3-D/	3' Thiol Modifier C3 S-S	Attachment Chemistry / Linkers
/3TYE563/	3' TYE™ 563	Fluorophores
/3TYE665/	3' TYE™ 665	Fluorophores
/3C6/	Hexanediol (Spacer C6)	Spacers

5ATTO700N Modification not available for 3-prime use.
The requested Oligo concentration of 0 is out of the bounds, using the default value of 2.5E-7

Mod Code	Mod Name	Category

# Bases: 0 (Min:10 Max:90) Min Yield: 0 nmoles

Formulation

Purification

Services

Na+ Salt Exchange $97.00 USD
Analytical RP-HPLC $72.00 USD
Analytical IE-HPLC pH 12.0 $72.00 USD

1 Items

A,G	C,G	A,C,G
C,T	A,T	A,G,T
A,C	A,C,T	A,C,G,T
G,T	C,G,T

%A	%C	%G	%T

Code	Scale
25nm	25 nmole
100nm	100 nmole
250nm	250 nmole
1um	1 µmole
2um	2 umole
5um	5 µmole
10um	10 µmole
4nmU	4 nmole Ultramer™
20nmU	20 nmole Ultramer™
PU	PAGE Ultramer™
25nmS	25 nmole Sameday

Code	Purification
STD	Standard Desalting
PAGE	PAGE $77.00 USD
HPLC	HPLC $53.00 USD
IEHPLC	IE HPLC $58.00 USD
RNASE	RNase Free HPLC $97.00 USD
DUALHPLC	Dual HPLC $103.00 USD
PAGEHPLC	Dual PAGE & HPLC $167.00 USD

Parameter sets


Target type
Oligo Conc	µM
Na⁺ Conc	mM
Mg⁺⁺ Conc	mM
dNTPs Conc	mM

Oligo Entry

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Oligo Entry

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5' mods

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